Cluster: Rep_2148_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_12 | 10502 | 11560 | - | CE4 |
| NULL(UNKNOWN) | Rep_2148_c_0 | Rep_2148_c_0_13 | 11560 | 12264 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_14 | 12491 | 12733 | + | TSCPD |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_15 | 12766 | 13833 | + | GT28 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_16 | 13911 | 15308 | - | 2.A.66.2.16 |
Gene ID: Rep_2148_c_0_12
Type: CAZyme
Location: 10502 - 11560 (-)
Type: CAZyme
Location: 10502 - 11560 (-)
Gene ID: Rep_2148_c_0_13
Type:
Location: 11560 - 12264 (-)
Type:
Location: 11560 - 12264 (-)
Gene ID: Rep_2148_c_0_14
Type: pfam
Location: 12491 - 12733 (+)
Type: pfam
Location: 12491 - 12733 (+)
Gene ID: Rep_2148_c_0_15
Type: CAZyme
Location: 12766 - 13833 (+)
Type: CAZyme
Location: 12766 - 13833 (+)
Gene ID: Rep_2148_c_0_16
Type: TC
Location: 13911 - 15308 (-)
Type: TC
Location: 13911 - 15308 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.