Cluster: Rep_2147_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2147
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2147_c_18 | Rep_2147_c_18_18 | 27000 | 27632 | - | 2.A.115.2.14 |
| TC | Rep_2147_c_18 | Rep_2147_c_18_19 | 27687 | 28433 | - | 3.A.1.3.20 |
| TC | Rep_2147_c_18 | Rep_2147_c_18_20 | 28446 | 29216 | - | 3.A.1.3.20 |
| TC | Rep_2147_c_18 | Rep_2147_c_18_21 | 29352 | 30215 | - | 3.A.1.3.20 |
| STP | Rep_2147_c_18 | Rep_2147_c_18_22 | 30607 | 31095 | - | HD |
| pfam | Rep_2147_c_18 | Rep_2147_c_18_23 | 31070 | 32401 | - | Mur_ligase_C | Mur_ligase_M |
| CAZyme | Rep_2147_c_18 | Rep_2147_c_18_24 | 32402 | 33478 | - | CE4 |
Gene ID: Rep_2147_c_18_18
Type: TC
Location: 27000 - 27632 (-)
Type: TC
Location: 27000 - 27632 (-)
Gene ID: Rep_2147_c_18_19
Type: TC
Location: 27687 - 28433 (-)
Type: TC
Location: 27687 - 28433 (-)
Gene ID: Rep_2147_c_18_20
Type: TC
Location: 28446 - 29216 (-)
Type: TC
Location: 28446 - 29216 (-)
Gene ID: Rep_2147_c_18_21
Type: TC
Location: 29352 - 30215 (-)
Type: TC
Location: 29352 - 30215 (-)
Gene ID: Rep_2147_c_18_22
Type: STP
Location: 30607 - 31095 (-)
Type: STP
Location: 30607 - 31095 (-)
Gene ID: Rep_2147_c_18_23
Type: pfam
Location: 31070 - 32401 (-)
Type: pfam
Location: 31070 - 32401 (-)
Gene ID: Rep_2147_c_18_24
Type: CAZyme
Location: 32402 - 33478 (-)
Type: CAZyme
Location: 32402 - 33478 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia sp022174665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.