Cluster: Rep_2147_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2147
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2147_c_31 | Rep_2147_c_31_12 | 18464 | 19849 | - | 2.A.2.3.2 |
| CAZyme | Rep_2147_c_31 | Rep_2147_c_31_13 | 19866 | 22904 | - | GH2 |
| TF | Rep_2147_c_31 | Rep_2147_c_31_14 | 23162 | 24025 | + | HTH_AraC | HTH_AraC |
| pfam | Rep_2147_c_31 | Rep_2147_c_31_15 | 24033 | 24647 | - | DUF6553 |
| TC | Rep_2147_c_31 | Rep_2147_c_31_16 | 24776 | 25819 | - | 3.A.1.2.3 |
| pfam | Rep_2147_c_31 | Rep_2147_c_31_17 | 25812 | 26783 | - | Peripla_BP_4 |
| TC | Rep_2147_c_31 | Rep_2147_c_31_18 | 26770 | 28593 | - | 8.A.59.2.1 |
| TF | Rep_2147_c_31 | Rep_2147_c_31_19 | 28690 | 30279 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2147_c_31 | Rep_2147_c_31_20 | 30726 | 32378 | - | 3.A.1.2.3 |
| TC | Rep_2147_c_31 | Rep_2147_c_31_21 | 32397 | 33905 | - | 3.A.1.2.3 |
| pfam | Rep_2147_c_31 | Rep_2147_c_31_22 | 33998 | 35260 | - | Peripla_BP_4 | Peripla_BP_7 |
| NULL(UNKNOWN) | Rep_2147_c_31 | Rep_2147_c_31_23 | 35568 | 36521 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2147_c_31 | Rep_2147_c_31_24 | 36550 | 38106 | - | 3.A.1.120.6 |
Gene ID: Rep_2147_c_31_12
Type: TC
Location: 18464 - 19849 (-)
Type: TC
Location: 18464 - 19849 (-)
Gene ID: Rep_2147_c_31_13
Type: CAZyme
Location: 19866 - 22904 (-)
Type: CAZyme
Location: 19866 - 22904 (-)
Gene ID: Rep_2147_c_31_14
Type: TF
Location: 23162 - 24025 (+)
Type: TF
Location: 23162 - 24025 (+)
Gene ID: Rep_2147_c_31_15
Type: pfam
Location: 24033 - 24647 (-)
Type: pfam
Location: 24033 - 24647 (-)
Gene ID: Rep_2147_c_31_16
Type: TC
Location: 24776 - 25819 (-)
Type: TC
Location: 24776 - 25819 (-)
Gene ID: Rep_2147_c_31_17
Type: pfam
Location: 25812 - 26783 (-)
Type: pfam
Location: 25812 - 26783 (-)
Gene ID: Rep_2147_c_31_18
Type: TC
Location: 26770 - 28593 (-)
Type: TC
Location: 26770 - 28593 (-)
Gene ID: Rep_2147_c_31_19
Type: TF
Location: 28690 - 30279 (-)
Type: TF
Location: 28690 - 30279 (-)
Gene ID: Rep_2147_c_31_20
Type: TC
Location: 30726 - 32378 (-)
Type: TC
Location: 30726 - 32378 (-)
Gene ID: Rep_2147_c_31_21
Type: TC
Location: 32397 - 33905 (-)
Type: TC
Location: 32397 - 33905 (-)
Gene ID: Rep_2147_c_31_22
Type: pfam
Location: 33998 - 35260 (-)
Type: pfam
Location: 33998 - 35260 (-)
Gene ID: Rep_2147_c_31_23
Type:
Location: 35568 - 36521 (-)
Type:
Location: 35568 - 36521 (-)
Gene ID: Rep_2147_c_31_24
Type: TC
Location: 36550 - 38106 (-)
Type: TC
Location: 36550 - 38106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia sp022174665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.