Cluster: Rep_2126_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_08028
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2126_c_3 | Rep_2126_c_3_2 | 923 | 2299 | - | 2.A.66.1.37 |
| STP | Rep_2126_c_3 | Rep_2126_c_3_3 | 2453 | 3004 | + | TetR_N |
| TF | Rep_2126_c_3 | Rep_2126_c_3_4 | 3001 | 4209 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2126_c_3 | Rep_2126_c_3_5 | 4211 | 5674 | - | 2.A.2.3.6 |
| CAZyme | Rep_2126_c_3 | Rep_2126_c_3_6 | 5889 | 8087 | + | GH2 |
Gene ID: Rep_2126_c_3_2
Type: TC
Location: 923 - 2299 (-)
Type: TC
Location: 923 - 2299 (-)
Gene ID: Rep_2126_c_3_3
Type: STP
Location: 2453 - 3004 (+)
Type: STP
Location: 2453 - 3004 (+)
Gene ID: Rep_2126_c_3_4
Type: TF
Location: 3001 - 4209 (+)
Type: TF
Location: 3001 - 4209 (+)
Gene ID: Rep_2126_c_3_5
Type: TC
Location: 4211 - 5674 (-)
Type: TC
Location: 4211 - 5674 (-)
Gene ID: Rep_2126_c_3_6
Type: CAZyme
Location: 5889 - 8087 (+)
Type: CAZyme
Location: 5889 - 8087 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.