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Cluster: Rep_2126_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2126_c_42 Rep_2126_c_42_4 3374 4897 + GH51_1
pfam Rep_2126_c_42 Rep_2126_c_42_5 4894 5154 + DUF6171
CAZyme Rep_2126_c_42 Rep_2126_c_42_6 5212 6855 + GH43_4
TC Rep_2126_c_42 Rep_2126_c_42_7 6915 7571 - 9.B.28.1.2
CAZyme Rep_2126_c_42 Rep_2126_c_42_8 7789 8766 + GH43_26
STP Rep_2126_c_42 Rep_2126_c_42_9 8976 10331 + SBP_bac_1
TC Rep_2126_c_42 Rep_2126_c_42_10 10453 11373 + 3.A.1.1.37
TC Rep_2126_c_42 Rep_2126_c_42_11 11388 12257 + 3.A.1.1.11
CAZyme Rep_2126_c_42 Rep_2126_c_42_12 12341 13660 + GH43_4
TF Rep_2126_c_42 Rep_2126_c_42_13 13736 14659 + HTH_5
TC Rep_2126_c_42 Rep_2126_c_42_14 14739 15926 + 9.B.10.1.1
Gene ID: Rep_2126_c_42_4
Type: CAZyme
Location: 3374 - 4897 (+)
Gene ID: Rep_2126_c_42_5
Type: pfam
Location: 4894 - 5154 (+)
Gene ID: Rep_2126_c_42_6
Type: CAZyme
Location: 5212 - 6855 (+)
Gene ID: Rep_2126_c_42_7
Type: TC
Location: 6915 - 7571 (-)
Gene ID: Rep_2126_c_42_8
Type: CAZyme
Location: 7789 - 8766 (+)
Gene ID: Rep_2126_c_42_9
Type: STP
Location: 8976 - 10331 (+)
Gene ID: Rep_2126_c_42_10
Type: TC
Location: 10453 - 11373 (+)
Gene ID: Rep_2126_c_42_11
Type: TC
Location: 11388 - 12257 (+)
Gene ID: Rep_2126_c_42_12
Type: CAZyme
Location: 12341 - 13660 (+)
Gene ID: Rep_2126_c_42_13
Type: TF
Location: 13736 - 14659 (+)
Gene ID: Rep_2126_c_42_14
Type: TC
Location: 14739 - 15926 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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