dbCAN Logo

Cluster: Rep_2126_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_41 Rep_2126_c_41_12 14143 15126 + 3.A.1.105.9
pfam Rep_2126_c_41 Rep_2126_c_41_13 15116 16426 + ABC2_membrane_3
pfam Rep_2126_c_41 Rep_2126_c_41_14 16428 17759 + ABC2_membrane_3
TC Rep_2126_c_41 Rep_2126_c_41_15 17778 18527 + 2.A.5.5.2
TF Rep_2126_c_41 Rep_2126_c_41_16 18723 19466 + LytTR
pfam Rep_2126_c_41 Rep_2126_c_41_17 19438 20757 - HATPase_c_5
CAZyme Rep_2126_c_41 Rep_2126_c_41_18 21002 22954 + GH43_35
CAZyme Rep_2126_c_41 Rep_2126_c_41_19 23346 25142 + GH43_35
Gene ID: Rep_2126_c_41_12
Type: TC
Location: 14143 - 15126 (+)
Gene ID: Rep_2126_c_41_13
Type: pfam
Location: 15116 - 16426 (+)
Gene ID: Rep_2126_c_41_14
Type: pfam
Location: 16428 - 17759 (+)
Gene ID: Rep_2126_c_41_15
Type: TC
Location: 17778 - 18527 (+)
Gene ID: Rep_2126_c_41_16
Type: TF
Location: 18723 - 19466 (+)
Gene ID: Rep_2126_c_41_17
Type: pfam
Location: 19438 - 20757 (-)
Gene ID: Rep_2126_c_41_18
Type: CAZyme
Location: 21002 - 22954 (+)
Gene ID: Rep_2126_c_41_19
Type: CAZyme
Location: 23346 - 25142 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List