Cluster: Rep_2126_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_01302
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2126_c_2 | Rep_2126_c_2_36 | 41601 | 42542 | + | GT2 |
| STP | Rep_2126_c_2 | Rep_2126_c_2_37 | 42803 | 43237 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | Rep_2126_c_2 | Rep_2126_c_2_38 | 43234 | 43470 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2126_c_2 | Rep_2126_c_2_39 | 43498 | 43731 | + | 3.D.1.6.4 |
Gene ID: Rep_2126_c_2_36
Type: CAZyme
Location: 41601 - 42542 (+)
Type: CAZyme
Location: 41601 - 42542 (+)
Gene ID: Rep_2126_c_2_37
Type: STP
Location: 42803 - 43237 (+)
Type: STP
Location: 42803 - 43237 (+)
Gene ID: Rep_2126_c_2_38
Type:
Location: 43234 - 43470 (+)
Type:
Location: 43234 - 43470 (+)
Gene ID: Rep_2126_c_2_39
Type: TC
Location: 43498 - 43731 (+)
Type: TC
Location: 43498 - 43731 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.