dbCAN Logo

Cluster: Rep_2126_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_20 Rep_2126_c_20_56 50775 52460 + 2.A.2.3.5
CAZyme Rep_2126_c_20 Rep_2126_c_20_57 52529 54874 + GH3
CAZyme Rep_2126_c_20 Rep_2126_c_20_58 54895 56445 + GH39
CAZyme Rep_2126_c_20 Rep_2126_c_20_59 56466 58838 + GH2
CAZyme Rep_2126_c_20 Rep_2126_c_20_60 58884 61520 + CBM67 | GH78
CAZyme Rep_2126_c_20 Rep_2126_c_20_61 61594 62667 + GH43_24
TF Rep_2126_c_20 Rep_2126_c_20_62 62889 63560 + Trans_reg_C
STP Rep_2126_c_20 Rep_2126_c_20_63 63548 64753 + HATPase_c | HisKA
TC Rep_2126_c_20 Rep_2126_c_20_64 64893 65603 + 3.A.1.148.3
Gene ID: Rep_2126_c_20_56
Type: TC
Location: 50775 - 52460 (+)
Gene ID: Rep_2126_c_20_57
Type: CAZyme
Location: 52529 - 54874 (+)
Gene ID: Rep_2126_c_20_58
Type: CAZyme
Location: 54895 - 56445 (+)
Gene ID: Rep_2126_c_20_59
Type: CAZyme
Location: 56466 - 58838 (+)
Gene ID: Rep_2126_c_20_60
Type: CAZyme
Location: 58884 - 61520 (+)
Gene ID: Rep_2126_c_20_61
Type: CAZyme
Location: 61594 - 62667 (+)
Gene ID: Rep_2126_c_20_62
Type: TF
Location: 62889 - 63560 (+)
Gene ID: Rep_2126_c_20_63
Type: STP
Location: 63548 - 64753 (+)
Gene ID: Rep_2126_c_20_64
Type: TC
Location: 64893 - 65603 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List