Cluster: Rep_2126_CGC50
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_09639
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2126_c_19 | Rep_2126_c_19_22 | 29281 | 31710 | - | GH3 |
| CAZyme | Rep_2126_c_19 | Rep_2126_c_19_23 | 31783 | 34671 | - | GH3 |
| pfam | Rep_2126_c_19 | Rep_2126_c_19_24 | 34781 | 36106 | - | HATPase_c_5 |
| TF | Rep_2126_c_19 | Rep_2126_c_19_25 | 36106 | 36810 | - | LytTR |
| TC | Rep_2126_c_19 | Rep_2126_c_19_26 | 37108 | 37953 | - | 8.A.5.1.4 |
| pfam | Rep_2126_c_19 | Rep_2126_c_19_27 | 37986 | 38546 | - | FMN_red |
| CAZyme | Rep_2126_c_19 | Rep_2126_c_19_28 | 38617 | 39663 | - | CE1 |
Gene ID: Rep_2126_c_19_22
Type: CAZyme
Location: 29281 - 31710 (-)
Type: CAZyme
Location: 29281 - 31710 (-)
Gene ID: Rep_2126_c_19_23
Type: CAZyme
Location: 31783 - 34671 (-)
Type: CAZyme
Location: 31783 - 34671 (-)
Gene ID: Rep_2126_c_19_24
Type: pfam
Location: 34781 - 36106 (-)
Type: pfam
Location: 34781 - 36106 (-)
Gene ID: Rep_2126_c_19_25
Type: TF
Location: 36106 - 36810 (-)
Type: TF
Location: 36106 - 36810 (-)
Gene ID: Rep_2126_c_19_26
Type: TC
Location: 37108 - 37953 (-)
Type: TC
Location: 37108 - 37953 (-)
Gene ID: Rep_2126_c_19_27
Type: pfam
Location: 37986 - 38546 (-)
Type: pfam
Location: 37986 - 38546 (-)
Gene ID: Rep_2126_c_19_28
Type: CAZyme
Location: 38617 - 39663 (-)
Type: CAZyme
Location: 38617 - 39663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.