dbCAN Logo

Cluster: Rep_2126_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2126_c_19 Rep_2126_c_19_7 4286 6721 - GH2
NULL(UNKNOWN) Rep_2126_c_19 Rep_2126_c_19_8 6742 9084 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2126_c_19 Rep_2126_c_19_9 9167 10810 - DUF3502
TC Rep_2126_c_19 Rep_2126_c_19_10 10869 11795 - 3.A.1.1.29
TC Rep_2126_c_19 Rep_2126_c_19_11 11814 12785 - 3.A.1.1.29
STP Rep_2126_c_19 Rep_2126_c_19_12 12835 14322 - SBP_bac_1
TF Rep_2126_c_19 Rep_2126_c_19_13 14677 16194 - HTH_AraC | HTH_AraC
TC Rep_2126_c_19 Rep_2126_c_19_14 16166 17920 - 8.A.59.2.1
CAZyme Rep_2126_c_19 Rep_2126_c_19_15 18088 21207 - GH38
CAZyme Rep_2126_c_19 Rep_2126_c_19_16 21218 22552 - GH125
CAZyme Rep_2126_c_19 Rep_2126_c_19_17 22605 25631 - CBM32 | GH85
Gene ID: Rep_2126_c_19_7
Type: CAZyme
Location: 4286 - 6721 (-)
Gene ID: Rep_2126_c_19_8
Type:
Location: 6742 - 9084 (-)
Gene ID: Rep_2126_c_19_9
Type: pfam
Location: 9167 - 10810 (-)
Gene ID: Rep_2126_c_19_10
Type: TC
Location: 10869 - 11795 (-)
Gene ID: Rep_2126_c_19_11
Type: TC
Location: 11814 - 12785 (-)
Gene ID: Rep_2126_c_19_12
Type: STP
Location: 12835 - 14322 (-)
Gene ID: Rep_2126_c_19_13
Type: TF
Location: 14677 - 16194 (-)
Gene ID: Rep_2126_c_19_14
Type: TC
Location: 16166 - 17920 (-)
Gene ID: Rep_2126_c_19_15
Type: CAZyme
Location: 18088 - 21207 (-)
Gene ID: Rep_2126_c_19_16
Type: CAZyme
Location: 21218 - 22552 (-)
Gene ID: Rep_2126_c_19_17
Type: CAZyme
Location: 22605 - 25631 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List