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Cluster: Rep_2126_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2126_c_14 Rep_2126_c_14_59 63336 64781 + GH43_35
NULL(UNKNOWN) Rep_2126_c_14 Rep_2126_c_14_60 64876 65457 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2126_c_14 Rep_2126_c_14_61 65483 69160 + GH3
pfam Rep_2126_c_14 Rep_2126_c_14_62 69259 70608 + Big_3 | Flg_new | Flg_new
CAZyme Rep_2126_c_14 Rep_2126_c_14_63 70692 73613 + GH3
pfam Rep_2126_c_14 Rep_2126_c_14_64 73749 75062 - AAA_14 | DUF4143
pfam Rep_2126_c_14 Rep_2126_c_14_65 75374 77071 + PDDEXK_9 | AAA-ATPase_like
TC Rep_2126_c_14 Rep_2126_c_14_66 77250 79079 + 8.A.59.2.1
Gene ID: Rep_2126_c_14_59
Type: CAZyme
Location: 63336 - 64781 (+)
Gene ID: Rep_2126_c_14_60
Type:
Location: 64876 - 65457 (+)
Gene ID: Rep_2126_c_14_61
Type: CAZyme
Location: 65483 - 69160 (+)
Gene ID: Rep_2126_c_14_62
Type: pfam
Location: 69259 - 70608 (+)
Gene ID: Rep_2126_c_14_63
Type: CAZyme
Location: 70692 - 73613 (+)
Gene ID: Rep_2126_c_14_64
Type: pfam
Location: 73749 - 75062 (-)
Gene ID: Rep_2126_c_14_65
Type: pfam
Location: 75374 - 77071 (+)
Gene ID: Rep_2126_c_14_66
Type: TC
Location: 77250 - 79079 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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