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Cluster: Rep_2126_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_13 Rep_2126_c_13_56 67984 68565 + 3.A.1.31.2
TC Rep_2126_c_13 Rep_2126_c_13_57 68565 69293 + 3.A.1.31.2
TC Rep_2126_c_13 Rep_2126_c_13_58 69303 70775 + 3.A.1.31.2
TF Rep_2126_c_13 Rep_2126_c_13_59 70795 71745 + HTH_AraC
TC Rep_2126_c_13 Rep_2126_c_13_60 71852 73645 + 3.A.1.21.1
TC Rep_2126_c_13 Rep_2126_c_13_61 73638 75386 + 3.A.1.21.1
TF Rep_2126_c_13 Rep_2126_c_13_62 75610 76575 + LacI
STP Rep_2126_c_13 Rep_2126_c_13_63 76836 78194 + SBP_bac_1
TC Rep_2126_c_13 Rep_2126_c_13_64 78304 79215 + 3.A.1.1.20
TC Rep_2126_c_13 Rep_2126_c_13_65 79228 80055 + 3.A.1.1.11
TC Rep_2126_c_13 Rep_2126_c_13_66 80069 81043 + 8.A.5.1.4
pfam Rep_2126_c_13 Rep_2126_c_13_67 81069 81584 + Glyoxalase | Glyoxalase_4
CAZyme Rep_2126_c_13 Rep_2126_c_13_68 81617 83140 + GH51_1
Gene ID: Rep_2126_c_13_56
Type: TC
Location: 67984 - 68565 (+)
Gene ID: Rep_2126_c_13_57
Type: TC
Location: 68565 - 69293 (+)
Gene ID: Rep_2126_c_13_58
Type: TC
Location: 69303 - 70775 (+)
Gene ID: Rep_2126_c_13_59
Type: TF
Location: 70795 - 71745 (+)
Gene ID: Rep_2126_c_13_60
Type: TC
Location: 71852 - 73645 (+)
Gene ID: Rep_2126_c_13_61
Type: TC
Location: 73638 - 75386 (+)
Gene ID: Rep_2126_c_13_62
Type: TF
Location: 75610 - 76575 (+)
Gene ID: Rep_2126_c_13_63
Type: STP
Location: 76836 - 78194 (+)
Gene ID: Rep_2126_c_13_64
Type: TC
Location: 78304 - 79215 (+)
Gene ID: Rep_2126_c_13_65
Type: TC
Location: 79228 - 80055 (+)
Gene ID: Rep_2126_c_13_66
Type: TC
Location: 80069 - 81043 (+)
Gene ID: Rep_2126_c_13_67
Type: pfam
Location: 81069 - 81584 (+)
Gene ID: Rep_2126_c_13_68
Type: CAZyme
Location: 81617 - 83140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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