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Cluster: Rep_2126_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_13 Rep_2126_c_13_27 35693 37066 + 2.A.66.1.28
TC Rep_2126_c_13 Rep_2126_c_13_28 37199 38500 - 2.A.56.1.5
pfam Rep_2126_c_13 Rep_2126_c_13_29 38497 39000 - DctQ
TC Rep_2126_c_13 Rep_2126_c_13_30 39015 40037 - 2.A.56.1.5
CAZyme Rep_2126_c_13 Rep_2126_c_13_31 40052 42553 - GH31_2
TF Rep_2126_c_13 Rep_2126_c_13_32 42820 43650 + HTH_AraC | HTH_AraC
TC Rep_2126_c_13 Rep_2126_c_13_33 43778 45262 + 3.A.1.121.4
Gene ID: Rep_2126_c_13_27
Type: TC
Location: 35693 - 37066 (+)
Gene ID: Rep_2126_c_13_28
Type: TC
Location: 37199 - 38500 (-)
Gene ID: Rep_2126_c_13_29
Type: pfam
Location: 38497 - 39000 (-)
Gene ID: Rep_2126_c_13_30
Type: TC
Location: 39015 - 40037 (-)
Gene ID: Rep_2126_c_13_31
Type: CAZyme
Location: 40052 - 42553 (-)
Gene ID: Rep_2126_c_13_32
Type: TF
Location: 42820 - 43650 (+)
Gene ID: Rep_2126_c_13_33
Type: TC
Location: 43778 - 45262 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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