Cluster: Rep_2126_CGC38
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2126
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2126_c_13 | Rep_2126_c_13_14 | 17913 | 19460 | + | 4.C.1.1.4 |
| STP | Rep_2126_c_13 | Rep_2126_c_13_15 | 19457 | 20059 | - | TetR_N |
| TC | Rep_2126_c_13 | Rep_2126_c_13_16 | 20225 | 21643 | + | 2.A.25.1.5 |
| CAZyme | Rep_2126_c_13 | Rep_2126_c_13_17 | 21942 | 24944 | + | GH3 |
| NULL(UNKNOWN) | Rep_2126_c_13 | Rep_2126_c_13_18 | 24988 | 25344 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2126_c_13 | Rep_2126_c_13_19 | 25341 | 27791 | + | GH2 |
Gene ID: Rep_2126_c_13_14
Type: TC
Location: 17913 - 19460 (+)
Type: TC
Location: 17913 - 19460 (+)
Gene ID: Rep_2126_c_13_15
Type: STP
Location: 19457 - 20059 (-)
Type: STP
Location: 19457 - 20059 (-)
Gene ID: Rep_2126_c_13_16
Type: TC
Location: 20225 - 21643 (+)
Type: TC
Location: 20225 - 21643 (+)
Gene ID: Rep_2126_c_13_17
Type: CAZyme
Location: 21942 - 24944 (+)
Type: CAZyme
Location: 21942 - 24944 (+)
Gene ID: Rep_2126_c_13_18
Type:
Location: 24988 - 25344 (+)
Type:
Location: 24988 - 25344 (+)
Gene ID: Rep_2126_c_13_19
Type: CAZyme
Location: 25341 - 27791 (+)
Type: CAZyme
Location: 25341 - 27791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.