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Cluster: Rep_2126_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_12 Rep_2126_c_12_77 87561 88364 - 3.A.1.11.2
TC Rep_2126_c_12 Rep_2126_c_12_78 88361 89158 - 3.A.1.11.8
TC Rep_2126_c_12 Rep_2126_c_12_79 89170 90609 - 3.A.1.11.8
TF Rep_2126_c_12 Rep_2126_c_12_80 90652 91209 - HTH_3
CAZyme Rep_2126_c_12 Rep_2126_c_12_81 91486 92826 - GH30_1
TF Rep_2126_c_12 Rep_2126_c_12_82 92838 93566 - HTH_AraC | HTH_AraC
TC Rep_2126_c_12 Rep_2126_c_12_83 93582 95420 - 9.B.33.1.1
TC Rep_2126_c_12 Rep_2126_c_12_84 95509 96354 - 3.A.1.1.17
TC Rep_2126_c_12 Rep_2126_c_12_85 96355 97236 - 3.A.1.1.18
Gene ID: Rep_2126_c_12_77
Type: TC
Location: 87561 - 88364 (-)
Gene ID: Rep_2126_c_12_78
Type: TC
Location: 88361 - 89158 (-)
Gene ID: Rep_2126_c_12_79
Type: TC
Location: 89170 - 90609 (-)
Gene ID: Rep_2126_c_12_80
Type: TF
Location: 90652 - 91209 (-)
Gene ID: Rep_2126_c_12_81
Type: CAZyme
Location: 91486 - 92826 (-)
Gene ID: Rep_2126_c_12_82
Type: TF
Location: 92838 - 93566 (-)
Gene ID: Rep_2126_c_12_83
Type: TC
Location: 93582 - 95420 (-)
Gene ID: Rep_2126_c_12_84
Type: TC
Location: 95509 - 96354 (-)
Gene ID: Rep_2126_c_12_85
Type: TC
Location: 96355 - 97236 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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