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Cluster: Rep_2126_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_12 Rep_2126_c_12_44 49924 50865 - 3.A.1.2.19
TC Rep_2126_c_12 Rep_2126_c_12_45 50882 52369 - 3.A.1.2.20
TC Rep_2126_c_12 Rep_2126_c_12_46 52413 53360 - 3.A.1.2.21
CAZyme Rep_2126_c_12 Rep_2126_c_12_47 53376 54173 - CE1
TF Rep_2126_c_12 Rep_2126_c_12_48 54479 55597 + 0040266
TF Rep_2126_c_12 Rep_2126_c_12_49 55724 56962 - HTH_AraC | HTH_AraC
TC Rep_2126_c_12 Rep_2126_c_12_50 57195 58139 - 3.A.1.1.9
TC Rep_2126_c_12 Rep_2126_c_12_51 58159 59124 - 3.A.1.1.10
Gene ID: Rep_2126_c_12_44
Type: TC
Location: 49924 - 50865 (-)
Gene ID: Rep_2126_c_12_45
Type: TC
Location: 50882 - 52369 (-)
Gene ID: Rep_2126_c_12_46
Type: TC
Location: 52413 - 53360 (-)
Gene ID: Rep_2126_c_12_47
Type: CAZyme
Location: 53376 - 54173 (-)
Gene ID: Rep_2126_c_12_48
Type: TF
Location: 54479 - 55597 (+)
Gene ID: Rep_2126_c_12_49
Type: TF
Location: 55724 - 56962 (-)
Gene ID: Rep_2126_c_12_50
Type: TC
Location: 57195 - 58139 (-)
Gene ID: Rep_2126_c_12_51
Type: TC
Location: 58159 - 59124 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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