Cluster: Rep_2126_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_10930
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2126_c_12 | Rep_2126_c_12_1 | 48 | 1397 | - | CBM91 | GH43_11 |
| TF | Rep_2126_c_12 | Rep_2126_c_12_2 | 1410 | 3005 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2126_c_12 | Rep_2126_c_12_3 | 3006 | 4772 | - | 8.A.59.2.1 |
| TC | Rep_2126_c_12 | Rep_2126_c_12_4 | 4861 | 5709 | - | 3.A.1.1.18 |
| TC | Rep_2126_c_12 | Rep_2126_c_12_5 | 5710 | 6606 | - | 3.A.1.1.18 |
| TC | Rep_2126_c_12 | Rep_2126_c_12_6 | 6710 | 7996 | - | 3.A.1.1.28 |
| CAZyme | Rep_2126_c_12 | Rep_2126_c_12_7 | 8194 | 10197 | - | GH120 |
Gene ID: Rep_2126_c_12_1
Type: CAZyme
Location: 48 - 1397 (-)
Type: CAZyme
Location: 48 - 1397 (-)
Gene ID: Rep_2126_c_12_2
Type: TF
Location: 1410 - 3005 (-)
Type: TF
Location: 1410 - 3005 (-)
Gene ID: Rep_2126_c_12_3
Type: TC
Location: 3006 - 4772 (-)
Type: TC
Location: 3006 - 4772 (-)
Gene ID: Rep_2126_c_12_4
Type: TC
Location: 4861 - 5709 (-)
Type: TC
Location: 4861 - 5709 (-)
Gene ID: Rep_2126_c_12_5
Type: TC
Location: 5710 - 6606 (-)
Type: TC
Location: 5710 - 6606 (-)
Gene ID: Rep_2126_c_12_6
Type: TC
Location: 6710 - 7996 (-)
Type: TC
Location: 6710 - 7996 (-)
Gene ID: Rep_2126_c_12_7
Type: CAZyme
Location: 8194 - 10197 (-)
Type: CAZyme
Location: 8194 - 10197 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.