Cluster: Rep_2126_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_04878
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2126_c_10 | Rep_2126_c_10_57 | 78541 | 79521 | - | GT2 |
| pfam | Rep_2126_c_10 | Rep_2126_c_10_58 | 79647 | 80759 | - | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3 | Choline_bind_3 |
| TC | Rep_2126_c_10 | Rep_2126_c_10_59 | 80964 | 81719 | - | 1.A.16.3.3 |
Gene ID: Rep_2126_c_10_57
Type: CAZyme
Location: 78541 - 79521 (-)
Type: CAZyme
Location: 78541 - 79521 (-)
Gene ID: Rep_2126_c_10_58
Type: pfam
Location: 79647 - 80759 (-)
Type: pfam
Location: 79647 - 80759 (-)
Gene ID: Rep_2126_c_10_59
Type: TC
Location: 80964 - 81719 (-)
Type: TC
Location: 80964 - 81719 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.