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Cluster: Rep_2126_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_10 Rep_2126_c_10_30 34404 35543 - 3.B.1.1.5
CAZyme Rep_2126_c_10 Rep_2126_c_10_31 36308 38407 - GH3
CAZyme Rep_2126_c_10 Rep_2126_c_10_32 38561 41488 - GH115
STP Rep_2126_c_10 Rep_2126_c_10_33 41609 43252 - SBP_bac_1
TC Rep_2126_c_10 Rep_2126_c_10_34 43309 44190 - 3.A.1.1.29
TC Rep_2126_c_10 Rep_2126_c_10_35 44207 45151 - 3.A.1.1.10
CAZyme Rep_2126_c_10 Rep_2126_c_10_36 45422 49033 - GH2
CAZyme Rep_2126_c_10 Rep_2126_c_10_37 49092 51218 - CE20 | CE20
CAZyme Rep_2126_c_10 Rep_2126_c_10_38 51333 52910 + CBM91 | GH43_12
Gene ID: Rep_2126_c_10_30
Type: TC
Location: 34404 - 35543 (-)
Gene ID: Rep_2126_c_10_31
Type: CAZyme
Location: 36308 - 38407 (-)
Gene ID: Rep_2126_c_10_32
Type: CAZyme
Location: 38561 - 41488 (-)
Gene ID: Rep_2126_c_10_33
Type: STP
Location: 41609 - 43252 (-)
Gene ID: Rep_2126_c_10_34
Type: TC
Location: 43309 - 44190 (-)
Gene ID: Rep_2126_c_10_35
Type: TC
Location: 44207 - 45151 (-)
Gene ID: Rep_2126_c_10_36
Type: CAZyme
Location: 45422 - 49033 (-)
Gene ID: Rep_2126_c_10_37
Type: CAZyme
Location: 49092 - 51218 (-)
Gene ID: Rep_2126_c_10_38
Type: CAZyme
Location: 51333 - 52910 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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