Cluster: Rep_2126_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2126
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2126_c_0 | Rep_2126_c_0_114 | 142465 | 143832 | - | 2.A.22.5.3 |
| TF | Rep_2126_c_0 | Rep_2126_c_0_115 | 144038 | 145438 | - | 0043095 |
| CAZyme | Rep_2126_c_0 | Rep_2126_c_0_116 | 145668 | 147263 | - | GH32 |
| CAZyme | Rep_2126_c_0 | Rep_2126_c_0_117 | 147253 | 148650 | - | GH32 |
| TC | Rep_2126_c_0 | Rep_2126_c_0_118 | 148697 | 149560 | - | 3.A.1.1.24 |
| TC | Rep_2126_c_0 | Rep_2126_c_0_119 | 149584 | 150471 | - | 3.A.1.1.42 |
Gene ID: Rep_2126_c_0_114
Type: TC
Location: 142465 - 143832 (-)
Type: TC
Location: 142465 - 143832 (-)
Gene ID: Rep_2126_c_0_115
Type: TF
Location: 144038 - 145438 (-)
Type: TF
Location: 144038 - 145438 (-)
Gene ID: Rep_2126_c_0_116
Type: CAZyme
Location: 145668 - 147263 (-)
Type: CAZyme
Location: 145668 - 147263 (-)
Gene ID: Rep_2126_c_0_117
Type: CAZyme
Location: 147253 - 148650 (-)
Type: CAZyme
Location: 147253 - 148650 (-)
Gene ID: Rep_2126_c_0_118
Type: TC
Location: 148697 - 149560 (-)
Type: TC
Location: 148697 - 149560 (-)
Gene ID: Rep_2126_c_0_119
Type: TC
Location: 149584 - 150471 (-)
Type: TC
Location: 149584 - 150471 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.