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Cluster: Rep_2126_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_8 Rep_2126_c_8_90 117891 119600 + 2.A.114.1.3
CAZyme Rep_2126_c_8 Rep_2126_c_8_91 119694 121601 - GH127
CAZyme Rep_2126_c_8 Rep_2126_c_8_92 121614 123497 - GH127
TC Rep_2126_c_8 Rep_2126_c_8_93 123518 124348 - 3.A.1.1.39
TC Rep_2126_c_8 Rep_2126_c_8_94 124351 125163 - 3.A.1.1.20
TC Rep_2126_c_8 Rep_2126_c_8_95 125285 126553 - 3.A.1.1.16
TF Rep_2126_c_8 Rep_2126_c_8_96 126675 127406 - HTH_AraC | HTH_AraC
TC Rep_2126_c_8 Rep_2126_c_8_97 127437 129209 - 9.B.33.1.1
TF Rep_2126_c_8 Rep_2126_c_8_98 129397 130887 + HTH_3
TC Rep_2126_c_8 Rep_2126_c_8_99 131007 131609 - 4.F.1.1.7
Gene ID: Rep_2126_c_8_90
Type: TC
Location: 117891 - 119600 (+)
Gene ID: Rep_2126_c_8_91
Type: CAZyme
Location: 119694 - 121601 (-)
Gene ID: Rep_2126_c_8_92
Type: CAZyme
Location: 121614 - 123497 (-)
Gene ID: Rep_2126_c_8_93
Type: TC
Location: 123518 - 124348 (-)
Gene ID: Rep_2126_c_8_94
Type: TC
Location: 124351 - 125163 (-)
Gene ID: Rep_2126_c_8_95
Type: TC
Location: 125285 - 126553 (-)
Gene ID: Rep_2126_c_8_96
Type: TF
Location: 126675 - 127406 (-)
Gene ID: Rep_2126_c_8_97
Type: TC
Location: 127437 - 129209 (-)
Gene ID: Rep_2126_c_8_98
Type: TF
Location: 129397 - 130887 (+)
Gene ID: Rep_2126_c_8_99
Type: TC
Location: 131007 - 131609 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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