dbCAN Logo

Cluster: Rep_2126_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_7 Rep_2126_c_7_80 93623 95851 - 3.A.11.3.1
pfam Rep_2126_c_7 Rep_2126_c_7_81 95848 97311 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
CAZyme Rep_2126_c_7 Rep_2126_c_7_82 97512 98804 - CBM4 | GH16_3
TC Rep_2126_c_7 Rep_2126_c_7_83 98962 99807 - 3.A.1.1.48
TC Rep_2126_c_7 Rep_2126_c_7_84 99807 100778 - 3.A.1.1.4
NULL(UNKNOWN) Rep_2126_c_7 Rep_2126_c_7_85 100858 102204 - NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_2126_c_7 Rep_2126_c_7_86 102379 103158 + HTH_AraC | HTH_AraC
CAZyme Rep_2126_c_7 Rep_2126_c_7_87 103191 105605 - GH94
CAZyme Rep_2126_c_7 Rep_2126_c_7_88 105607 108063 - GH94
CAZyme Rep_2126_c_7 Rep_2126_c_7_89 108087 110798 - GH94
Gene ID: Rep_2126_c_7_80
Type: TC
Location: 93623 - 95851 (-)
Gene ID: Rep_2126_c_7_81
Type: pfam
Location: 95848 - 97311 (-)
Gene ID: Rep_2126_c_7_82
Type: CAZyme
Location: 97512 - 98804 (-)
Gene ID: Rep_2126_c_7_83
Type: TC
Location: 98962 - 99807 (-)
Gene ID: Rep_2126_c_7_84
Type: TC
Location: 99807 - 100778 (-)
Gene ID: Rep_2126_c_7_85
Type:
Location: 100858 - 102204 (-)
Gene ID: Rep_2126_c_7_86
Type: TF
Location: 102379 - 103158 (+)
Gene ID: Rep_2126_c_7_87
Type: CAZyme
Location: 103191 - 105605 (-)
Gene ID: Rep_2126_c_7_88
Type: CAZyme
Location: 105607 - 108063 (-)
Gene ID: Rep_2126_c_7_89
Type: CAZyme
Location: 108087 - 110798 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List