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Cluster: Rep_2126_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2126_c_7 Rep_2126_c_7_59 69718 70806 - GH179
TC Rep_2126_c_7 Rep_2126_c_7_60 70812 71663 - 3.A.1.1.39
TC Rep_2126_c_7 Rep_2126_c_7_61 71679 72554 - 3.A.1.1.36
STP Rep_2126_c_7 Rep_2126_c_7_62 72628 73902 - SBP_bac_1
TF Rep_2126_c_7 Rep_2126_c_7_63 74183 75772 - HTH_AraC | HTH_AraC
TC Rep_2126_c_7 Rep_2126_c_7_64 75775 77538 - 9.B.33.1.2
pfam Rep_2126_c_7 Rep_2126_c_7_65 77531 78283 - Amidohydro_2
pfam Rep_2126_c_7 Rep_2126_c_7_66 78280 79968 - ILVD_EDD_N | ILV_EDD_C
CAZyme Rep_2126_c_7 Rep_2126_c_7_67 80024 82639 - CBM67 | GH78
Gene ID: Rep_2126_c_7_59
Type: CAZyme
Location: 69718 - 70806 (-)
Gene ID: Rep_2126_c_7_60
Type: TC
Location: 70812 - 71663 (-)
Gene ID: Rep_2126_c_7_61
Type: TC
Location: 71679 - 72554 (-)
Gene ID: Rep_2126_c_7_62
Type: STP
Location: 72628 - 73902 (-)
Gene ID: Rep_2126_c_7_63
Type: TF
Location: 74183 - 75772 (-)
Gene ID: Rep_2126_c_7_64
Type: TC
Location: 75775 - 77538 (-)
Gene ID: Rep_2126_c_7_65
Type: pfam
Location: 77531 - 78283 (-)
Gene ID: Rep_2126_c_7_66
Type: pfam
Location: 78280 - 79968 (-)
Gene ID: Rep_2126_c_7_67
Type: CAZyme
Location: 80024 - 82639 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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