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Cluster: Rep_2126_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_6 Rep_2126_c_6_37 35102 36529 + 1.A.26.1.3
CAZyme Rep_2126_c_6 Rep_2126_c_6_38 36578 38047 - GH32
STP Rep_2126_c_6 Rep_2126_c_6_39 38054 39352 - SBP_bac_1
TF Rep_2126_c_6 Rep_2126_c_6_40 39448 40971 - HTH_AraC | HTH_AraC
TC Rep_2126_c_6 Rep_2126_c_6_41 40946 42733 - 8.A.59.2.1
TC Rep_2126_c_6 Rep_2126_c_6_42 42736 43587 - 3.A.1.1.33
TC Rep_2126_c_6 Rep_2126_c_6_43 43584 44468 - 3.A.1.1.37
Gene ID: Rep_2126_c_6_37
Type: TC
Location: 35102 - 36529 (+)
Gene ID: Rep_2126_c_6_38
Type: CAZyme
Location: 36578 - 38047 (-)
Gene ID: Rep_2126_c_6_39
Type: STP
Location: 38054 - 39352 (-)
Gene ID: Rep_2126_c_6_40
Type: TF
Location: 39448 - 40971 (-)
Gene ID: Rep_2126_c_6_41
Type: TC
Location: 40946 - 42733 (-)
Gene ID: Rep_2126_c_6_42
Type: TC
Location: 42736 - 43587 (-)
Gene ID: Rep_2126_c_6_43
Type: TC
Location: 43584 - 44468 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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