Cluster: Rep_2126_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_03012
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2126_c_5 | Rep_2126_c_5_55 | 68569 | 69816 | + | 3.A.1.1.40 |
| TC | Rep_2126_c_5 | Rep_2126_c_5_56 | 69879 | 70784 | + | 3.A.1.1.20 |
| TC | Rep_2126_c_5 | Rep_2126_c_5_57 | 70777 | 71661 | + | 3.A.1.1.20 |
| CAZyme | Rep_2126_c_5 | Rep_2126_c_5_58 | 71686 | 74157 | + | GH116 |
| CAZyme | Rep_2126_c_5 | Rep_2126_c_5_59 | 74159 | 75637 | + | GH32 |
Gene ID: Rep_2126_c_5_55
Type: TC
Location: 68569 - 69816 (+)
Type: TC
Location: 68569 - 69816 (+)
Gene ID: Rep_2126_c_5_56
Type: TC
Location: 69879 - 70784 (+)
Type: TC
Location: 69879 - 70784 (+)
Gene ID: Rep_2126_c_5_57
Type: TC
Location: 70777 - 71661 (+)
Type: TC
Location: 70777 - 71661 (+)
Gene ID: Rep_2126_c_5_58
Type: CAZyme
Location: 71686 - 74157 (+)
Type: CAZyme
Location: 71686 - 74157 (+)
Gene ID: Rep_2126_c_5_59
Type: CAZyme
Location: 74159 - 75637 (+)
Type: CAZyme
Location: 74159 - 75637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.