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Cluster: Rep_2126_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_4 Rep_2126_c_4_88 99445 100353 + 3.A.1.1.9
TC Rep_2126_c_4 Rep_2126_c_4_89 100366 101250 + 3.A.1.1.9
CAZyme Rep_2126_c_4 Rep_2126_c_4_90 101260 103095 + PL27
CAZyme Rep_2126_c_4 Rep_2126_c_4_91 103109 105118 + GH42
pfam Rep_2126_c_4 Rep_2126_c_4_92 105333 106451 - APH
STP Rep_2126_c_4 Rep_2126_c_4_93 106698 107918 + SBP_bac_1
TC Rep_2126_c_4 Rep_2126_c_4_94 108022 108912 + 3.A.1.1.46
TC Rep_2126_c_4 Rep_2126_c_4_95 108905 109771 + 3.A.1.1.25
Gene ID: Rep_2126_c_4_88
Type: TC
Location: 99445 - 100353 (+)
Gene ID: Rep_2126_c_4_89
Type: TC
Location: 100366 - 101250 (+)
Gene ID: Rep_2126_c_4_90
Type: CAZyme
Location: 101260 - 103095 (+)
Gene ID: Rep_2126_c_4_91
Type: CAZyme
Location: 103109 - 105118 (+)
Gene ID: Rep_2126_c_4_92
Type: pfam
Location: 105333 - 106451 (-)
Gene ID: Rep_2126_c_4_93
Type: STP
Location: 106698 - 107918 (+)
Gene ID: Rep_2126_c_4_94
Type: TC
Location: 108022 - 108912 (+)
Gene ID: Rep_2126_c_4_95
Type: TC
Location: 108905 - 109771 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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