Cluster: Rep_2126_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_00295
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2126_c_3 | Rep_2126_c_3_100 | 115641 | 116996 | - | 2.A.66.1.33 |
| pfam | Rep_2126_c_3 | Rep_2126_c_3_101 | 117079 | 117843 | - | Lyx_isomer |
| CAZyme | Rep_2126_c_3 | Rep_2126_c_3_102 | 117895 | 120417 | - | GH2 |
| TC | Rep_2126_c_3 | Rep_2126_c_3_103 | 120504 | 121331 | - | 3.A.1.1.36 |
| TC | Rep_2126_c_3 | Rep_2126_c_3_104 | 121331 | 122233 | - | 3.A.1.1.46 |
| TC | Rep_2126_c_3 | Rep_2126_c_3_105 | 122350 | 123663 | - | 3.A.1.1.21 |
Gene ID: Rep_2126_c_3_100
Type: TC
Location: 115641 - 116996 (-)
Type: TC
Location: 115641 - 116996 (-)
Gene ID: Rep_2126_c_3_101
Type: pfam
Location: 117079 - 117843 (-)
Type: pfam
Location: 117079 - 117843 (-)
Gene ID: Rep_2126_c_3_102
Type: CAZyme
Location: 117895 - 120417 (-)
Type: CAZyme
Location: 117895 - 120417 (-)
Gene ID: Rep_2126_c_3_103
Type: TC
Location: 120504 - 121331 (-)
Type: TC
Location: 120504 - 121331 (-)
Gene ID: Rep_2126_c_3_104
Type: TC
Location: 121331 - 122233 (-)
Type: TC
Location: 121331 - 122233 (-)
Gene ID: Rep_2126_c_3_105
Type: TC
Location: 122350 - 123663 (-)
Type: TC
Location: 122350 - 123663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.