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Cluster: Rep_2126_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2126_c_3 Rep_2126_c_3_41 45358 46545 - 2.A.86.1.8
TC Rep_2126_c_3 Rep_2126_c_3_42 46576 49185 - 3.A.3.2.21
pfam Rep_2126_c_3 Rep_2126_c_3_43 49500 50033 - DUF308 | DUF308 | DUF308
TC Rep_2126_c_3 Rep_2126_c_3_44 50030 51859 - 3.A.16.1.2
NULL(UNKNOWN) Rep_2126_c_3 Rep_2126_c_3_45 51856 52278 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_2126_c_3 Rep_2126_c_3_46 52433 52963 - TetR_N
TC Rep_2126_c_3 Rep_2126_c_3_47 53069 54859 - 1.A.11.2.7
CAZyme Rep_2126_c_3 Rep_2126_c_3_48 55217 56416 - GH88
CAZyme Rep_2126_c_3 Rep_2126_c_3_49 56435 58222 - GH2
TC Rep_2126_c_3 Rep_2126_c_3_50 58240 58542 - 3.A.1.1.45
NULL(UNKNOWN) Rep_2126_c_3 Rep_2126_c_3_51 58512 59069 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2126_c_3 Rep_2126_c_3_52 59082 59987 - 3.A.1.1.11
Gene ID: Rep_2126_c_3_41
Type: TC
Location: 45358 - 46545 (-)
Gene ID: Rep_2126_c_3_42
Type: TC
Location: 46576 - 49185 (-)
Gene ID: Rep_2126_c_3_43
Type: pfam
Location: 49500 - 50033 (-)
Gene ID: Rep_2126_c_3_44
Type: TC
Location: 50030 - 51859 (-)
Gene ID: Rep_2126_c_3_45
Type:
Location: 51856 - 52278 (-)
Gene ID: Rep_2126_c_3_46
Type: STP
Location: 52433 - 52963 (-)
Gene ID: Rep_2126_c_3_47
Type: TC
Location: 53069 - 54859 (-)
Gene ID: Rep_2126_c_3_48
Type: CAZyme
Location: 55217 - 56416 (-)
Gene ID: Rep_2126_c_3_49
Type: CAZyme
Location: 56435 - 58222 (-)
Gene ID: Rep_2126_c_3_50
Type: TC
Location: 58240 - 58542 (-)
Gene ID: Rep_2126_c_3_51
Type:
Location: 58512 - 59069 (-)
Gene ID: Rep_2126_c_3_52
Type: TC
Location: 59082 - 59987 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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