Cluster: Rep_2126_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2126
- CGC Family ID: CGCFAM_00032
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2126_c_0 | Rep_2126_c_0_11 | 11694 | 12467 | - | GT2 |
| TC | Rep_2126_c_0 | Rep_2126_c_0_12 | 12495 | 13892 | - | 9.B.18.1.3 |
| NULL(UNKNOWN) | Rep_2126_c_0 | Rep_2126_c_0_13 | 14156 | 14944 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2126_c_0 | Rep_2126_c_0_14 | 14948 | 16075 | - | DUF6077 |
| TC | Rep_2126_c_0 | Rep_2126_c_0_15 | 16276 | 17670 | + | 9.B.10.1.1 |
| TC | Rep_2126_c_0 | Rep_2126_c_0_16 | 17761 | 18024 | - | 8.A.8.1.6 |
Gene ID: Rep_2126_c_0_11
Type: CAZyme
Location: 11694 - 12467 (-)
Type: CAZyme
Location: 11694 - 12467 (-)
Gene ID: Rep_2126_c_0_12
Type: TC
Location: 12495 - 13892 (-)
Type: TC
Location: 12495 - 13892 (-)
Gene ID: Rep_2126_c_0_13
Type:
Location: 14156 - 14944 (-)
Type:
Location: 14156 - 14944 (-)
Gene ID: Rep_2126_c_0_14
Type: pfam
Location: 14948 - 16075 (-)
Type: pfam
Location: 14948 - 16075 (-)
Gene ID: Rep_2126_c_0_15
Type: TC
Location: 16276 - 17670 (+)
Type: TC
Location: 16276 - 17670 (+)
Gene ID: Rep_2126_c_0_16
Type: TC
Location: 17761 - 18024 (-)
Type: TC
Location: 17761 - 18024 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.