Cluster: Rep_2125_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2125
- CGC Family ID: CGCFAM_02959
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2125_c_67 | Rep_2125_c_67_2 | 426 | 2708 | + | 3.A.1.135.6 |
| TC | Rep_2125_c_67 | Rep_2125_c_67_3 | 2705 | 4555 | + | 3.A.1.135.6 |
| pfam | Rep_2125_c_67 | Rep_2125_c_67_4 | 4557 | 5168 | + | Cytidylate_kin2 |
| NULL(UNKNOWN) | Rep_2125_c_67 | Rep_2125_c_67_5 | 5284 | 7110 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2125_c_67 | Rep_2125_c_67_6 | 7280 | 9889 | - | GT51 |
Gene ID: Rep_2125_c_67_2
Type: TC
Location: 426 - 2708 (+)
Type: TC
Location: 426 - 2708 (+)
Gene ID: Rep_2125_c_67_3
Type: TC
Location: 2705 - 4555 (+)
Type: TC
Location: 2705 - 4555 (+)
Gene ID: Rep_2125_c_67_4
Type: pfam
Location: 4557 - 5168 (+)
Type: pfam
Location: 4557 - 5168 (+)
Gene ID: Rep_2125_c_67_5
Type:
Location: 5284 - 7110 (+)
Type:
Location: 5284 - 7110 (+)
Gene ID: Rep_2125_c_67_6
Type: CAZyme
Location: 7280 - 9889 (-)
Type: CAZyme
Location: 7280 - 9889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.