Cluster: Rep_2125_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2125
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2125_c_27 | Rep_2125_c_27_2 | 570 | 2492 | + | GH123 |
| pfam | Rep_2125_c_27 | Rep_2125_c_27_3 | 2670 | 3881 | + | NPCBM_assoc | NPCBM_assoc |
| TC | Rep_2125_c_27 | Rep_2125_c_27_4 | 3884 | 4885 | + | 3.A.1.132.8 |
| TC | Rep_2125_c_27 | Rep_2125_c_27_5 | 4827 | 5840 | + | 3.A.1.132.8 |
Gene ID: Rep_2125_c_27_2
Type: CAZyme
Location: 570 - 2492 (+)
Type: CAZyme
Location: 570 - 2492 (+)
Gene ID: Rep_2125_c_27_3
Type: pfam
Location: 2670 - 3881 (+)
Type: pfam
Location: 2670 - 3881 (+)
Gene ID: Rep_2125_c_27_4
Type: TC
Location: 3884 - 4885 (+)
Type: TC
Location: 3884 - 4885 (+)
Gene ID: Rep_2125_c_27_5
Type: TC
Location: 4827 - 5840 (+)
Type: TC
Location: 4827 - 5840 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.