Cluster: Rep_2125_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2125
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2125_c_411 | Rep_2125_c_411_10 | 10792 | 12594 | + | GT2 | GT2 |
| CAZyme | Rep_2125_c_411 | Rep_2125_c_411_11 | 12647 | 13603 | + | GT2 |
| TC | Rep_2125_c_411 | Rep_2125_c_411_12 | 13631 | 15031 | + | 9.B.18.1.1 |
| pfam | Rep_2125_c_411 | Rep_2125_c_411_13 | 15046 | 16377 | + | LytR_cpsA_psr |
| CAZyme | Rep_2125_c_411 | Rep_2125_c_411_14 | 16399 | 17316 | + | GT2 |
Gene ID: Rep_2125_c_411_10
Type: CAZyme
Location: 10792 - 12594 (+)
Type: CAZyme
Location: 10792 - 12594 (+)
Gene ID: Rep_2125_c_411_11
Type: CAZyme
Location: 12647 - 13603 (+)
Type: CAZyme
Location: 12647 - 13603 (+)
Gene ID: Rep_2125_c_411_12
Type: TC
Location: 13631 - 15031 (+)
Type: TC
Location: 13631 - 15031 (+)
Gene ID: Rep_2125_c_411_13
Type: pfam
Location: 15046 - 16377 (+)
Type: pfam
Location: 15046 - 16377 (+)
Gene ID: Rep_2125_c_411_14
Type: CAZyme
Location: 16399 - 17316 (+)
Type: CAZyme
Location: 16399 - 17316 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.