Cluster: Rep_2125_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2125
- CGC Family ID: CGCFAM_00009
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2125_c_367 | Rep_2125_c_367_1 | 3 | 539 | - | GT2 |
| pfam | Rep_2125_c_367 | Rep_2125_c_367_2 | 560 | 2647 | - | CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | Rep_2125_c_367 | Rep_2125_c_367_3 | 2700 | 3968 | - | 3.A.1.103.6 |
| TC | Rep_2125_c_367 | Rep_2125_c_367_4 | 4129 | 4941 | - | 3.A.1.104.1 |
Gene ID: Rep_2125_c_367_1
Type: CAZyme
Location: 3 - 539 (-)
Type: CAZyme
Location: 3 - 539 (-)
Gene ID: Rep_2125_c_367_2
Type: pfam
Location: 560 - 2647 (-)
Type: pfam
Location: 560 - 2647 (-)
Gene ID: Rep_2125_c_367_3
Type: TC
Location: 2700 - 3968 (-)
Type: TC
Location: 2700 - 3968 (-)
Gene ID: Rep_2125_c_367_4
Type: TC
Location: 4129 - 4941 (-)
Type: TC
Location: 4129 - 4941 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.