Cluster: Rep_2125_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2125
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2125_c_346 | Rep_2125_c_346_2 | 1288 | 2115 | - | CE4 |
| pfam | Rep_2125_c_346 | Rep_2125_c_346_3 | 2375 | 3394 | + | YARHG |
| STP | Rep_2125_c_346 | Rep_2125_c_346_4 | 3631 | 4212 | - | Pribosyltran |
| TC | Rep_2125_c_346 | Rep_2125_c_346_5 | 4611 | 6500 | - | 3.A.1.11.7 |
Gene ID: Rep_2125_c_346_2
Type: CAZyme
Location: 1288 - 2115 (-)
Type: CAZyme
Location: 1288 - 2115 (-)
Gene ID: Rep_2125_c_346_3
Type: pfam
Location: 2375 - 3394 (+)
Type: pfam
Location: 2375 - 3394 (+)
Gene ID: Rep_2125_c_346_4
Type: STP
Location: 3631 - 4212 (-)
Type: STP
Location: 3631 - 4212 (-)
Gene ID: Rep_2125_c_346_5
Type: TC
Location: 4611 - 6500 (-)
Type: TC
Location: 4611 - 6500 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.