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Cluster: Rep_2125_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2125_c_341 Rep_2125_c_341_1 25 873 - 3.A.1.26.7
TC Rep_2125_c_341 Rep_2125_c_341_2 863 1735 - 3.A.1.26.7
TF Rep_2125_c_341 Rep_2125_c_341_3 1836 2861 - LacI
CAZyme Rep_2125_c_341 Rep_2125_c_341_4 2962 4449 - GH77
TC Rep_2125_c_341 Rep_2125_c_341_5 4492 5331 - 3.A.1.1.45
TC Rep_2125_c_341 Rep_2125_c_341_6 5331 6182 - 3.A.1.1.45
TC Rep_2125_c_341 Rep_2125_c_341_7 6325 7638 - 3.A.1.1.45
TC Rep_2125_c_341 Rep_2125_c_341_8 7924 9417 - 2.A.50.2.1
Gene ID: Rep_2125_c_341_1
Type: TC
Location: 25 - 873 (-)
Gene ID: Rep_2125_c_341_2
Type: TC
Location: 863 - 1735 (-)
Gene ID: Rep_2125_c_341_3
Type: TF
Location: 1836 - 2861 (-)
Gene ID: Rep_2125_c_341_4
Type: CAZyme
Location: 2962 - 4449 (-)
Gene ID: Rep_2125_c_341_5
Type: TC
Location: 4492 - 5331 (-)
Gene ID: Rep_2125_c_341_6
Type: TC
Location: 5331 - 6182 (-)
Gene ID: Rep_2125_c_341_7
Type: TC
Location: 6325 - 7638 (-)
Gene ID: Rep_2125_c_341_8
Type: TC
Location: 7924 - 9417 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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