Cluster: Rep_2125_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2125
- CGC Family ID: CGCFAM_01535
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2125_c_12 | Rep_2125_c_12_2 | 305 | 2137 | - | GH110 |
| TC | Rep_2125_c_12 | Rep_2125_c_12_3 | 2226 | 3578 | - | 3.A.1.1.39 |
| TC | Rep_2125_c_12 | Rep_2125_c_12_4 | 3593 | 4498 | - | 3.A.1.1.17 |
| STP | Rep_2125_c_12 | Rep_2125_c_12_5 | 4788 | 6107 | + | SBP_bac_1 |
| TC | Rep_2125_c_12 | Rep_2125_c_12_6 | 6273 | 8231 | + | 8.A.59.2.1 |
Gene ID: Rep_2125_c_12_2
Type: CAZyme
Location: 305 - 2137 (-)
Type: CAZyme
Location: 305 - 2137 (-)
Gene ID: Rep_2125_c_12_3
Type: TC
Location: 2226 - 3578 (-)
Type: TC
Location: 2226 - 3578 (-)
Gene ID: Rep_2125_c_12_4
Type: TC
Location: 3593 - 4498 (-)
Type: TC
Location: 3593 - 4498 (-)
Gene ID: Rep_2125_c_12_5
Type: STP
Location: 4788 - 6107 (+)
Type: STP
Location: 4788 - 6107 (+)
Gene ID: Rep_2125_c_12_6
Type: TC
Location: 6273 - 8231 (+)
Type: TC
Location: 6273 - 8231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.