Cluster: Rep_2125_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2125
- CGC Family ID: CGCFAM_01753
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2125_c_228 | Rep_2125_c_228_1 | 102 | 1007 | + | 3.A.1.1.11 |
| TC | Rep_2125_c_228 | Rep_2125_c_228_2 | 997 | 1821 | + | 3.A.1.1.39 |
| CAZyme | Rep_2125_c_228 | Rep_2125_c_228_3 | 1864 | 3858 | + | GH31_1 |
| TC | Rep_2125_c_228 | Rep_2125_c_228_4 | 3958 | 5274 | - | 2.A.35.1.5 |
| TC | Rep_2125_c_228 | Rep_2125_c_228_5 | 5797 | 6522 | + | 3.A.1.26.7 |
Gene ID: Rep_2125_c_228_1
Type: TC
Location: 102 - 1007 (+)
Type: TC
Location: 102 - 1007 (+)
Gene ID: Rep_2125_c_228_2
Type: TC
Location: 997 - 1821 (+)
Type: TC
Location: 997 - 1821 (+)
Gene ID: Rep_2125_c_228_3
Type: CAZyme
Location: 1864 - 3858 (+)
Type: CAZyme
Location: 1864 - 3858 (+)
Gene ID: Rep_2125_c_228_4
Type: TC
Location: 3958 - 5274 (-)
Type: TC
Location: 3958 - 5274 (-)
Gene ID: Rep_2125_c_228_5
Type: TC
Location: 5797 - 6522 (+)
Type: TC
Location: 5797 - 6522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.