Cluster: Rep_2125_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2125
- CGC Family ID: CGCFAM_02592
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2125_c_203 | Rep_2125_c_203_2 | 418 | 3516 | - | GH38 |
| CAZyme | Rep_2125_c_203 | Rep_2125_c_203_3 | 3604 | 5514 | - | GH20 |
| pfam | Rep_2125_c_203 | Rep_2125_c_203_4 | 5713 | 7134 | - | DUF3502 |
| TC | Rep_2125_c_203 | Rep_2125_c_203_5 | 7232 | 8158 | - | 3.A.1.1.29 |
| TC | Rep_2125_c_203 | Rep_2125_c_203_6 | 8171 | 9130 | - | 3.A.1.1.25 |
Gene ID: Rep_2125_c_203_2
Type: CAZyme
Location: 418 - 3516 (-)
Type: CAZyme
Location: 418 - 3516 (-)
Gene ID: Rep_2125_c_203_3
Type: CAZyme
Location: 3604 - 5514 (-)
Type: CAZyme
Location: 3604 - 5514 (-)
Gene ID: Rep_2125_c_203_4
Type: pfam
Location: 5713 - 7134 (-)
Type: pfam
Location: 5713 - 7134 (-)
Gene ID: Rep_2125_c_203_5
Type: TC
Location: 7232 - 8158 (-)
Type: TC
Location: 7232 - 8158 (-)
Gene ID: Rep_2125_c_203_6
Type: TC
Location: 8171 - 9130 (-)
Type: TC
Location: 8171 - 9130 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.