Cluster: Rep_2125_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2125
- CGC Family ID: CGCFAM_11036
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2125_c_129 | Rep_2125_c_129_1 | 1 | 1386 | - | 2.A.50.2.1 |
| pfam | Rep_2125_c_129 | Rep_2125_c_129_2 | 1582 | 2619 | + | Lipase_GDSL_2 |
| pfam | Rep_2125_c_129 | Rep_2125_c_129_3 | 2647 | 3114 | + | DUF4358 |
| TC | Rep_2125_c_129 | Rep_2125_c_129_4 | 3226 | 4581 | - | 2.A.66.1.33 |
| pfam | Rep_2125_c_129 | Rep_2125_c_129_5 | 4902 | 5651 | - | SIR2 |
| pfam | Rep_2125_c_129 | Rep_2125_c_129_6 | 5702 | 6091 | - | Trns_repr_metal |
| CAZyme | Rep_2125_c_129 | Rep_2125_c_129_7 | 6091 | 8766 | - | CBM48 | GH13_9 |
Gene ID: Rep_2125_c_129_1
Type: TC
Location: 1 - 1386 (-)
Type: TC
Location: 1 - 1386 (-)
Gene ID: Rep_2125_c_129_2
Type: pfam
Location: 1582 - 2619 (+)
Type: pfam
Location: 1582 - 2619 (+)
Gene ID: Rep_2125_c_129_3
Type: pfam
Location: 2647 - 3114 (+)
Type: pfam
Location: 2647 - 3114 (+)
Gene ID: Rep_2125_c_129_4
Type: TC
Location: 3226 - 4581 (-)
Type: TC
Location: 3226 - 4581 (-)
Gene ID: Rep_2125_c_129_5
Type: pfam
Location: 4902 - 5651 (-)
Type: pfam
Location: 4902 - 5651 (-)
Gene ID: Rep_2125_c_129_6
Type: pfam
Location: 5702 - 6091 (-)
Type: pfam
Location: 5702 - 6091 (-)
Gene ID: Rep_2125_c_129_7
Type: CAZyme
Location: 6091 - 8766 (-)
Type: CAZyme
Location: 6091 - 8766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.