Cluster: Rep_2125_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2125
- CGC Family ID: CGCFAM_11037
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2125_c_7 | Rep_2125_c_7_17 | 14999 | 16627 | - | 2.A.35.2.1 |
| pfam | Rep_2125_c_7 | Rep_2125_c_7_18 | 17167 | 17913 | - | adh_short | Epimerase | Polysacc_synt_2 | KR | adh_short_C2 | SDR |
| CAZyme | Rep_2125_c_7 | Rep_2125_c_7_19 | 18114 | 19733 | - | CBM91 | GH43_11 |
| CAZyme | Rep_2125_c_7 | Rep_2125_c_7_20 | 19730 | 21268 | - | GH51_1 |
| TC | Rep_2125_c_7 | Rep_2125_c_7_21 | 21282 | 22109 | - | 3.A.1.1.41 |
Gene ID: Rep_2125_c_7_17
Type: TC
Location: 14999 - 16627 (-)
Type: TC
Location: 14999 - 16627 (-)
Gene ID: Rep_2125_c_7_18
Type: pfam
Location: 17167 - 17913 (-)
Type: pfam
Location: 17167 - 17913 (-)
Gene ID: Rep_2125_c_7_19
Type: CAZyme
Location: 18114 - 19733 (-)
Type: CAZyme
Location: 18114 - 19733 (-)
Gene ID: Rep_2125_c_7_20
Type: CAZyme
Location: 19730 - 21268 (-)
Type: CAZyme
Location: 19730 - 21268 (-)
Gene ID: Rep_2125_c_7_21
Type: TC
Location: 21282 - 22109 (-)
Type: TC
Location: 21282 - 22109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp958422845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.