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Cluster: Rep_2106_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2106_c_12 Rep_2106_c_12_2 851 1861 - 2.A.56.1.5
TC Rep_2106_c_12 Rep_2106_c_12_3 1969 3258 - 2.A.56.1.5
pfam Rep_2106_c_12 Rep_2106_c_12_4 3258 3767 - DctQ
TC Rep_2106_c_12 Rep_2106_c_12_5 3888 5033 - 2.A.56.1.1
TC Rep_2106_c_12 Rep_2106_c_12_6 5195 6661 - 8.A.59.2.1
CAZyme Rep_2106_c_12 Rep_2106_c_12_7 6703 9024 - CBM48 | GH13_9
sulfatase Rep_2106_c_12 Rep_2106_c_12_8 9046 9942 - S1_56
pfam Rep_2106_c_12 Rep_2106_c_12_9 10112 10978 - PDDEXK_2
TC Rep_2106_c_12 Rep_2106_c_12_10 11211 13868 - 3.A.3.2.21
peptidase Rep_2106_c_12 Rep_2106_c_12_11 13991 15145 - M20.UNW
CAZyme Rep_2106_c_12 Rep_2106_c_12_12 15135 16997 - GH13_11
peptidase Rep_2106_c_12 Rep_2106_c_12_13 17181 18620 - M38.UNW
TC Rep_2106_c_12 Rep_2106_c_12_14 18672 19598 - 3.A.1.2.18
TC Rep_2106_c_12 Rep_2106_c_12_15 19595 20737 - 3.A.1.2.12
TC Rep_2106_c_12 Rep_2106_c_12_16 20741 22255 - 3.A.1.2.12
Gene ID: Rep_2106_c_12_2
Type: TC
Location: 851 - 1861 (-)
Gene ID: Rep_2106_c_12_3
Type: TC
Location: 1969 - 3258 (-)
Gene ID: Rep_2106_c_12_4
Type: pfam
Location: 3258 - 3767 (-)
Gene ID: Rep_2106_c_12_5
Type: TC
Location: 3888 - 5033 (-)
Gene ID: Rep_2106_c_12_6
Type: TC
Location: 5195 - 6661 (-)
Gene ID: Rep_2106_c_12_7
Type: CAZyme
Location: 6703 - 9024 (-)
Gene ID: Rep_2106_c_12_8
Type: sulfatase
Location: 9046 - 9942 (-)
Gene ID: Rep_2106_c_12_9
Type: pfam
Location: 10112 - 10978 (-)
Gene ID: Rep_2106_c_12_10
Type: TC
Location: 11211 - 13868 (-)
Gene ID: Rep_2106_c_12_11
Type: peptidase
Location: 13991 - 15145 (-)
Gene ID: Rep_2106_c_12_12
Type: CAZyme
Location: 15135 - 16997 (-)
Gene ID: Rep_2106_c_12_13
Type: peptidase
Location: 17181 - 18620 (-)
Gene ID: Rep_2106_c_12_14
Type: TC
Location: 18672 - 19598 (-)
Gene ID: Rep_2106_c_12_15
Type: TC
Location: 19595 - 20737 (-)
Gene ID: Rep_2106_c_12_16
Type: TC
Location: 20741 - 22255 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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