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Cluster: Rep_2106_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2106_c_8 Rep_2106_c_8_13 13739 15088 + 2.A.66.1.32
pfam Rep_2106_c_8 Rep_2106_c_8_14 15085 16176 - Methyltransf_5
pfam Rep_2106_c_8 Rep_2106_c_8_15 16232 16876 - Prenyltransf
TC Rep_2106_c_8 Rep_2106_c_8_16 16951 18903 - 2.A.16.2.2
CAZyme Rep_2106_c_8 Rep_2106_c_8_17 18984 19853 + CE4
Gene ID: Rep_2106_c_8_13
Type: TC
Location: 13739 - 15088 (+)
Gene ID: Rep_2106_c_8_14
Type: pfam
Location: 15085 - 16176 (-)
Gene ID: Rep_2106_c_8_15
Type: pfam
Location: 16232 - 16876 (-)
Gene ID: Rep_2106_c_8_16
Type: TC
Location: 16951 - 18903 (-)
Gene ID: Rep_2106_c_8_17
Type: CAZyme
Location: 18984 - 19853 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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