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Cluster: Rep_2106_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2106_c_65 Rep_2106_c_65_2 599 1498 + 2.A.115.1.1
pfam Rep_2106_c_65 Rep_2106_c_65_3 1704 3419 + DUF5722
STP Rep_2106_c_65 Rep_2106_c_65_4 3566 4777 + ACT | ACT
TC Rep_2106_c_65 Rep_2106_c_65_5 5078 6529 + 3.B.1.1.5
pfam Rep_2106_c_65 Rep_2106_c_65_6 6547 7365 + OAD_gamma
TC Rep_2106_c_65 Rep_2106_c_65_7 7419 7805 + 3.B.1.1.2
TC Rep_2106_c_65 Rep_2106_c_65_8 7854 8999 + 3.B.1.1.3
TC Rep_2106_c_65 Rep_2106_c_65_9 9032 10444 + 3.B.1.1.6
CAZyme Rep_2106_c_65 Rep_2106_c_65_10 10616 12889 - GT35
CAZyme Rep_2106_c_65 Rep_2106_c_65_11 12997 13725 + GH77
Gene ID: Rep_2106_c_65_2
Type: TC
Location: 599 - 1498 (+)
Gene ID: Rep_2106_c_65_3
Type: pfam
Location: 1704 - 3419 (+)
Gene ID: Rep_2106_c_65_4
Type: STP
Location: 3566 - 4777 (+)
Gene ID: Rep_2106_c_65_5
Type: TC
Location: 5078 - 6529 (+)
Gene ID: Rep_2106_c_65_6
Type: pfam
Location: 6547 - 7365 (+)
Gene ID: Rep_2106_c_65_7
Type: TC
Location: 7419 - 7805 (+)
Gene ID: Rep_2106_c_65_8
Type: TC
Location: 7854 - 8999 (+)
Gene ID: Rep_2106_c_65_9
Type: TC
Location: 9032 - 10444 (+)
Gene ID: Rep_2106_c_65_10
Type: CAZyme
Location: 10616 - 12889 (-)
Gene ID: Rep_2106_c_65_11
Type: CAZyme
Location: 12997 - 13725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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