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Cluster: Rep_2106_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2106_c_40 Rep_2106_c_40_1 22 915 - 3.A.1.1.11
NULL(UNKNOWN) Rep_2106_c_40 Rep_2106_c_40_2 939 1247 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2106_c_40 Rep_2106_c_40_3 1489 2877 - 3.A.1.1.11
CAZyme Rep_2106_c_40 Rep_2106_c_40_4 3285 4442 + GH105
pfam Rep_2106_c_40 Rep_2106_c_40_5 4549 5202 + TAL_FSA
pfam Rep_2106_c_40 Rep_2106_c_40_6 5251 5913 - PhoU | PhoU
TC Rep_2106_c_40 Rep_2106_c_40_7 5938 6699 - 3.A.1.7.5
TC Rep_2106_c_40 Rep_2106_c_40_8 6714 7616 - 3.A.1.7.5
TC Rep_2106_c_40 Rep_2106_c_40_9 7613 8545 - 3.A.1.7.5
Gene ID: Rep_2106_c_40_1
Type: TC
Location: 22 - 915 (-)
Gene ID: Rep_2106_c_40_2
Type:
Location: 939 - 1247 (-)
Gene ID: Rep_2106_c_40_3
Type: TC
Location: 1489 - 2877 (-)
Gene ID: Rep_2106_c_40_4
Type: CAZyme
Location: 3285 - 4442 (+)
Gene ID: Rep_2106_c_40_5
Type: pfam
Location: 4549 - 5202 (+)
Gene ID: Rep_2106_c_40_6
Type: pfam
Location: 5251 - 5913 (-)
Gene ID: Rep_2106_c_40_7
Type: TC
Location: 5938 - 6699 (-)
Gene ID: Rep_2106_c_40_8
Type: TC
Location: 6714 - 7616 (-)
Gene ID: Rep_2106_c_40_9
Type: TC
Location: 7613 - 8545 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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