Cluster: Rep_2087_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2087
- CGC Family ID: CGCFAM_03713
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2087_c_23 | Rep_2087_c_23_28 | 32088 | 33155 | - | 2.A.86.1.3 |
| pfam | Rep_2087_c_23 | Rep_2087_c_23_29 | 33222 | 33932 | - | PseudoU_synth_2 |
| TC | Rep_2087_c_23 | Rep_2087_c_23_30 | 34065 | 34718 | + | 1.C.113.1.2 |
| CAZyme | Rep_2087_c_23 | Rep_2087_c_23_31 | 34954 | 36516 | - | CBM50 |
Gene ID: Rep_2087_c_23_28
Type: TC
Location: 32088 - 33155 (-)
Type: TC
Location: 32088 - 33155 (-)
Gene ID: Rep_2087_c_23_29
Type: pfam
Location: 33222 - 33932 (-)
Type: pfam
Location: 33222 - 33932 (-)
Gene ID: Rep_2087_c_23_30
Type: TC
Location: 34065 - 34718 (+)
Type: TC
Location: 34065 - 34718 (+)
Gene ID: Rep_2087_c_23_31
Type: CAZyme
Location: 34954 - 36516 (-)
Type: CAZyme
Location: 34954 - 36516 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902477765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.