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Cluster: Rep_2087_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2087_c_6 Rep_2087_c_6_66 65299 65946 - 2.A.38.4.3
TC Rep_2087_c_6 Rep_2087_c_6_67 65992 67302 - 2.A.38.4.1
peptidase Rep_2087_c_6 Rep_2087_c_6_68 67427 68533 - M20.UPB
pfam Rep_2087_c_6 Rep_2087_c_6_69 68652 69284 - NERD
TC Rep_2087_c_6 Rep_2087_c_6_70 69664 71202 + 2.A.68.1.1
TC Rep_2087_c_6 Rep_2087_c_6_71 71821 73359 + 2.A.68.1.1
TC Rep_2087_c_6 Rep_2087_c_6_72 73508 74185 + 9.B.143.2.3
pfam Rep_2087_c_6 Rep_2087_c_6_73 74373 74840 - C_GCAxxG_C_C
CAZyme Rep_2087_c_6 Rep_2087_c_6_74 75075 76217 + CE9
Gene ID: Rep_2087_c_6_66
Type: TC
Location: 65299 - 65946 (-)
Gene ID: Rep_2087_c_6_67
Type: TC
Location: 65992 - 67302 (-)
Gene ID: Rep_2087_c_6_68
Type: peptidase
Location: 67427 - 68533 (-)
Gene ID: Rep_2087_c_6_69
Type: pfam
Location: 68652 - 69284 (-)
Gene ID: Rep_2087_c_6_70
Type: TC
Location: 69664 - 71202 (+)
Gene ID: Rep_2087_c_6_71
Type: TC
Location: 71821 - 73359 (+)
Gene ID: Rep_2087_c_6_72
Type: TC
Location: 73508 - 74185 (+)
Gene ID: Rep_2087_c_6_73
Type: pfam
Location: 74373 - 74840 (-)
Gene ID: Rep_2087_c_6_74
Type: CAZyme
Location: 75075 - 76217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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