Cluster: Rep_2087_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2087
- CGC Family ID: CGCFAM_03053
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2087_c_5 | Rep_2087_c_5_14 | 12826 | 14190 | + | 2.A.66.1.32 |
| pfam | Rep_2087_c_5 | Rep_2087_c_5_15 | 14161 | 15402 | - | Usp | DUF4118 |
| TC | Rep_2087_c_5 | Rep_2087_c_5_16 | 15564 | 17201 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | Rep_2087_c_5 | Rep_2087_c_5_17 | 17449 | 17757 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2087_c_5 | Rep_2087_c_5_18 | 17754 | 18350 | + | 2.A.124.1.3 |
| TF | Rep_2087_c_5 | Rep_2087_c_5_19 | 18637 | 18849 | - | CSD |
| CAZyme | Rep_2087_c_5 | Rep_2087_c_5_20 | 19045 | 20544 | - | GH77 |
Gene ID: Rep_2087_c_5_14
Type: TC
Location: 12826 - 14190 (+)
Type: TC
Location: 12826 - 14190 (+)
Gene ID: Rep_2087_c_5_15
Type: pfam
Location: 14161 - 15402 (-)
Type: pfam
Location: 14161 - 15402 (-)
Gene ID: Rep_2087_c_5_16
Type: TC
Location: 15564 - 17201 (-)
Type: TC
Location: 15564 - 17201 (-)
Gene ID: Rep_2087_c_5_17
Type:
Location: 17449 - 17757 (+)
Type:
Location: 17449 - 17757 (+)
Gene ID: Rep_2087_c_5_18
Type: TC
Location: 17754 - 18350 (+)
Type: TC
Location: 17754 - 18350 (+)
Gene ID: Rep_2087_c_5_19
Type: TF
Location: 18637 - 18849 (-)
Type: TF
Location: 18637 - 18849 (-)
Gene ID: Rep_2087_c_5_20
Type: CAZyme
Location: 19045 - 20544 (-)
Type: CAZyme
Location: 19045 - 20544 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902477765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.