Cluster: Rep_2087_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2087
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2087_c_3 | Rep_2087_c_3_66 | 62493 | 63116 | + | 9.B.104.1.3 |
| pfam | Rep_2087_c_3 | Rep_2087_c_3_67 | 63106 | 63522 | + | HIT | DcpS_C |
| STP | Rep_2087_c_3 | Rep_2087_c_3_68 | 63546 | 64082 | + | Sigma70_r4_2 |
| CAZyme | Rep_2087_c_3 | Rep_2087_c_3_69 | 64073 | 65146 | - | GT28 |
Gene ID: Rep_2087_c_3_66
Type: TC
Location: 62493 - 63116 (+)
Type: TC
Location: 62493 - 63116 (+)
Gene ID: Rep_2087_c_3_67
Type: pfam
Location: 63106 - 63522 (+)
Type: pfam
Location: 63106 - 63522 (+)
Gene ID: Rep_2087_c_3_68
Type: STP
Location: 63546 - 64082 (+)
Type: STP
Location: 63546 - 64082 (+)
Gene ID: Rep_2087_c_3_69
Type: CAZyme
Location: 64073 - 65146 (-)
Type: CAZyme
Location: 64073 - 65146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902477765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.