Cluster: Rep_2087_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2087
- CGC Family ID: CGCFAM_02316
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2087_c_3 | Rep_2087_c_3_48 | 43182 | 43583 | + | 2.A.66.1.33 |
| TC | Rep_2087_c_3 | Rep_2087_c_3_49 | 43531 | 44538 | + | 2.A.66.1.33 |
| STP | Rep_2087_c_3 | Rep_2087_c_3_50 | 44679 | 46973 | - | HATPase_c | HisKA |
| TF | Rep_2087_c_3 | Rep_2087_c_3_51 | 46986 | 47684 | - | Trans_reg_C |
| CAZyme | Rep_2087_c_3 | Rep_2087_c_3_52 | 47844 | 49796 | - | CBM48 | GH13_9 |
| CAZyme | Rep_2087_c_3 | Rep_2087_c_3_53 | 49799 | 51142 | - | GH13_20 |
Gene ID: Rep_2087_c_3_48
Type: TC
Location: 43182 - 43583 (+)
Type: TC
Location: 43182 - 43583 (+)
Gene ID: Rep_2087_c_3_49
Type: TC
Location: 43531 - 44538 (+)
Type: TC
Location: 43531 - 44538 (+)
Gene ID: Rep_2087_c_3_50
Type: STP
Location: 44679 - 46973 (-)
Type: STP
Location: 44679 - 46973 (-)
Gene ID: Rep_2087_c_3_51
Type: TF
Location: 46986 - 47684 (-)
Type: TF
Location: 46986 - 47684 (-)
Gene ID: Rep_2087_c_3_52
Type: CAZyme
Location: 47844 - 49796 (-)
Type: CAZyme
Location: 47844 - 49796 (-)
Gene ID: Rep_2087_c_3_53
Type: CAZyme
Location: 49799 - 51142 (-)
Type: CAZyme
Location: 49799 - 51142 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902477765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.