Cluster: Rep_2087_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2087
- CGC Family ID: CGCFAM_00201
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2087_c_51 | Rep_2087_c_51_1 | 2 | 1984 | - | GH73 |
| pfam | Rep_2087_c_51 | Rep_2087_c_51_2 | 2125 | 2658 | - | VanZ |
| TC | Rep_2087_c_51 | Rep_2087_c_51_3 | 2876 | 4288 | - | 3.B.1.1.6 |
| TC | Rep_2087_c_51 | Rep_2087_c_51_4 | 4331 | 5479 | - | 3.B.1.1.3 |
| TC | Rep_2087_c_51 | Rep_2087_c_51_5 | 5518 | 5922 | - | 3.B.1.1.2 |
| pfam | Rep_2087_c_51 | Rep_2087_c_51_6 | 5944 | 6768 | - | OAD_gamma |
| TC | Rep_2087_c_51 | Rep_2087_c_51_7 | 6786 | 8225 | - | 3.B.1.1.5 |
Gene ID: Rep_2087_c_51_1
Type: CAZyme
Location: 2 - 1984 (-)
Type: CAZyme
Location: 2 - 1984 (-)
Gene ID: Rep_2087_c_51_2
Type: pfam
Location: 2125 - 2658 (-)
Type: pfam
Location: 2125 - 2658 (-)
Gene ID: Rep_2087_c_51_3
Type: TC
Location: 2876 - 4288 (-)
Type: TC
Location: 2876 - 4288 (-)
Gene ID: Rep_2087_c_51_4
Type: TC
Location: 4331 - 5479 (-)
Type: TC
Location: 4331 - 5479 (-)
Gene ID: Rep_2087_c_51_5
Type: TC
Location: 5518 - 5922 (-)
Type: TC
Location: 5518 - 5922 (-)
Gene ID: Rep_2087_c_51_6
Type: pfam
Location: 5944 - 6768 (-)
Type: pfam
Location: 5944 - 6768 (-)
Gene ID: Rep_2087_c_51_7
Type: TC
Location: 6786 - 8225 (-)
Type: TC
Location: 6786 - 8225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp902477765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.